STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYJ54_20175Amino acid permease. (455 aa)    
Predicted Functional Partners:
AYJ54_28085
Alpha-amylase.
   
 0.985
AYJ54_44520
Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase.
   
 0.985
AYJ54_44525
Alpha-amylase.
   
 0.985
AYJ54_20170
Uncharacterized protein.
 
     0.918
AYJ54_43845
Cytochrome D ubiquinol oxidase subunit I.
  
 
 0.678
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.668
nadE-3
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.668
AYJ54_38440
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.644
AYJ54_16805
Uncharacterized protein.
   
 0.624
AYJ54_38455
Prephenate dehydratase.
    
 0.619
Your Current Organism:
Bradyrhizobium centrolobii
NCBI taxonomy Id: 1505087
Other names: B. centrolobii, Bradyrhizobium sp. BR 10245, Bradyrhizobium sp. BR 10290, Bradyrhizobium sp. BR 10351, HAMBI:3597, strain BR 10245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.