STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD35916.1Transcriptional antiterminator. (678 aa)    
Predicted Functional Partners:
SFD35886.1
PTS system, ascorbate-specific IIC component.
 
     0.946
SFD35897.1
PTS system IIB component, L-Asc family (TC 4.A.7); Manually curated.
 
     0.946
SFD35868.1
Transketolase; Belongs to the transketolase family.
 
     0.770
SFD34070.1
Lichenan operon transcriptional antiterminator.
  
     0.716
SFD51793.1
Transcriptional antiterminator, BglG family.
  
     0.669
SFD58651.1
PTS system IIC component, L-Asc family (TC 4.A.7).
  
     0.406
SFD46869.1
LytTr DNA-binding domain-containing protein.
  
     0.401
Your Current Organism:
Lactobacillus bombicola
NCBI taxonomy Id: 1505723
Other names: DSM 28793, L. bombicola, LMG 28288, LMG:28288, Lactobacillus bombicola Praet et al. 2015, Lactobacillus sp. R-53102, strain R-53102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.