STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD53430.11-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (309 aa)    
Predicted Functional Partners:
SFD37150.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
 
 0.999
SFD53449.1
PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component.
 
 0.999
SFD53473.1
PTS system, fructose subfamily, IIA component.
  
 
 0.999
SFD42824.1
Fructose-bisphosphate aldolase, class II.
  
 
 0.946
SFD37174.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 
0.937
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
     
 0.933
SFD52767.1
PTS system, mannose-specific IIB component.
    
 0.909
lacD
Tagatose-bisphosphate aldolase; Belongs to the aldolase LacD family.
  
 
 0.863
SFD53169.1
Galactose-6-phosphate isomerase.
  
 
 0.849
SFD34154.1
PTS system IIB component, Fru family.
 
 
 0.802
Your Current Organism:
Lactobacillus bombicola
NCBI taxonomy Id: 1505723
Other names: DSM 28793, L. bombicola, LMG 28288, LMG:28288, Lactobacillus bombicola Praet et al. 2015, Lactobacillus sp. R-53102, strain R-53102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.