STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD60595.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
SFD60609.1
Hypothetical protein.
       0.793
SFD60580.1
Hypothetical protein.
       0.792
SFD60567.1
LysM domain-containing protein.
       0.776
SFD60623.1
Protein of unknown function.
       0.738
SFD60640.1
Hypothetical protein.
       0.738
SFD60682.1
Protein of unknown function.
       0.711
SFD60654.1
Hypothetical protein.
       0.685
SFD60668.1
Hypothetical protein.
       0.685
SFD60699.1
Hypothetical protein.
       0.668
SFD60725.1
Hypothetical protein.
       0.649
Your Current Organism:
Lactobacillus bombicola
NCBI taxonomy Id: 1505723
Other names: DSM 28793, L. bombicola, LMG 28288, LMG:28288, Lactobacillus bombicola Praet et al. 2015, Lactobacillus sp. R-53102, strain R-53102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.