STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000696575_02742Unannotated protein. (518 aa)    
Predicted Functional Partners:
GCA_000696575_00777
Unannotated protein.
 
 
 0.815
GCA_000696575_02557
Unannotated protein.
    
  0.768
GCA_000696575_04007
Unannotated protein.
  
 
 0.706
GCA_000696575_02743
Unannotated protein.
     
 0.662
GCA_000696575_02080
Unannotated protein.
    
  0.598
GCA_000696575_00101
Unannotated protein.
 
  
 0.594
GCA_000696575_01089
Unannotated protein.
     
 0.593
GCA_000696575_01955
Unannotated protein.
  
  
  0.593
GCA_000696575_03752
Unannotated protein.
     
 0.590
GCA_000696575_00194
Unannotated protein.
     
 0.579
Your Current Organism:
Siccibacter colletis
NCBI taxonomy Id: 1505757
Other names: CECT 8567, Candidatus Cronobacter colletis, Cronobacter colletis, Cronobacter sp. NCTC 14934, LMG 28204, LMG:28204, NCTC 14934, S. colletis, Siccibacter colletis Jackson et al. 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.