STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEU_02975Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (648 aa)    
Predicted Functional Partners:
TEU_02970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.962
TEU_01890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.841
TEU_02965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
TEU_02955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.629
TEU_02960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
rpl22
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
     
 0.625
rps9
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.
     
 0.620
TEU_06565
DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.620
rsmA
16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
     
 0.581
TEU_04570
Alkaline serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
   
 0.520
Your Current Organism:
Thermococcus eurythermalis
NCBI taxonomy Id: 1505907
Other names: CGMCC 7834, JCM 30233, T. eurythermalis, Thermococcus eurythermalis Zhao et al. 2015, Thermococcus sp. A501, strain A501
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