STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX31093.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (225 aa)    
Predicted Functional Partners:
CDX17547.1
Multi-sensor hybrid histidine kinase.
   
 
 0.966
CDX26403.1
Sensor kinase.
    
 
 0.965
CDX32614.1
Two-component sensor/response regulator hybrid.
    
 
 0.965
CDX34717.1
Hybrid sensory histidine kinase (fragment).
    
 
 0.965
MPLSOD_20260
Fragment of conserved hypothetical protein (part 2); No homology to any previously reported sequences.
    
 
 0.965
CDX34868.1
ATPase domain-containing protein.
    
 
 0.965
CDX39517.1
Putative sensor/response regulator hybrid protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 
 0.965
CDX31095.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.918
CDX31090.1
Transcriptional regulator, TetR family.
 
    0.860
CDX43548.1
Band 7 protein.
 
  
 0.846
Your Current Organism:
Mesorhizobium sp. SOD10
NCBI taxonomy Id: 1505946
Other names: M. sp. SOD10
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