STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX38284.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (71 aa)    
Predicted Functional Partners:
CDX38281.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.806
CDX38276.1
Putative Binding-protein-dependent transport systems inner membrane component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.686
potA-5
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
       0.686
CDX38273.1
Putative Extracellular solute-binding protein family 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.646
CDX38270.1
Transcriptional regulator protein.
       0.482
Your Current Organism:
Mesorhizobium sp. SOD10
NCBI taxonomy Id: 1505946
Other names: M. sp. SOD10
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