STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX38999.140-residue YVTN family beta-propeller repeat protein. (319 aa)    
Predicted Functional Partners:
CDX39005.1
ABC-2 type transporter.
 
  
 0.969
CDX38996.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.963
CDX39002.1
ABC transporter related protein.
 
 
  0.963
fixP
Cbb3-type cytochrome c oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.916
pqqE
Coenzyme PQQ synthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.895
CDX39024.1
Cytochrome c class I.
  
 0.861
cycG
Diheme cytochrome c-type.
  
 0.861
CDX19700.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.858
xoxF
Putative dehydrogenase XoxF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
  0.855
CDX39840.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.838
Your Current Organism:
Mesorhizobium sp. SOD10
NCBI taxonomy Id: 1505946
Other names: M. sp. SOD10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.