STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_18480Uncharacterized protein. (672 aa)    
Predicted Functional Partners:
B0A48_18900
YTH domain-containing protein.
   
 0.886
B0A48_18853
Uncharacterized protein.
   
 0.886
B0A48_18773
Uncharacterized protein.
   
 0.886
B0A48_18735
Uncharacterized protein.
   
 0.886
B0A48_05972
Uncharacterized protein.
   
 0.886
B0A48_05114
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.826
B0A48_17972
HORMA domain-containing protein.
   
 0.814
B0A48_17238
HORMA domain-containing protein.
   
 0.814
B0A48_14585
TFIID_20kDa domain-containing protein.
   
 0.805
B0A48_12515
Uncharacterized protein.
    
 0.805
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.