B0A48_16077 protein (Rachicladosporium antarcticum)

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

B0A48_16077

Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (399 aa)

Predicted Functional Partners:

B0A48_14609

0.991

B0A48_10683

0.991

B0A48_00058

0.982

B0A48_16568

0.980

B0A48_16259

0.961

B0A48_01931

0.961

B0A48_14764

0.926

B0A48_14194

0.920

B0A48_12281

0.905

B0A48_03316

0.905

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_00058	B0A48_01931	A0A1V8TTN1	A0A1V8TR45	Uncharacterized protein.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.693
B0A48_00058	B0A48_03316	A0A1V8TTN1	A0A1V8TJN8	Uncharacterized protein.	HEM4 domain-containing protein.	0.991
B0A48_00058	B0A48_10683	A0A1V8TTN1	A0A1V8SY85	Uncharacterized protein.	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	0.619
B0A48_00058	B0A48_12281	A0A1V8TTN1	A0A1V8SS09	Uncharacterized protein.	HEM4 domain-containing protein.	0.991
B0A48_00058	B0A48_14194	A0A1V8TTN1	A0A1V8SLN2	Uncharacterized protein.	Uncharacterized protein.	0.620
B0A48_00058	B0A48_14609	A0A1V8TTN1	A0A1V8SL79	Uncharacterized protein.	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	0.619
B0A48_00058	B0A48_14764	A0A1V8TTN1	A0A1V8SKG4	Uncharacterized protein.	Uncharacterized protein.	0.628
B0A48_00058	B0A48_16077	A0A1V8TTN1	A0A1V8SF38	Uncharacterized protein.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.982
B0A48_00058	B0A48_16259	A0A1V8TTN1	A0A1V8SFM7	Uncharacterized protein.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.693
B0A48_01931	B0A48_00058	A0A1V8TR45	A0A1V8TTN1	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.693
B0A48_01931	B0A48_03316	A0A1V8TR45	A0A1V8TJN8	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	HEM4 domain-containing protein.	0.598
B0A48_01931	B0A48_10683	A0A1V8TR45	A0A1V8SY85	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	0.982
B0A48_01931	B0A48_12281	A0A1V8TR45	A0A1V8SS09	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	HEM4 domain-containing protein.	0.598
B0A48_01931	B0A48_14194	A0A1V8TR45	A0A1V8SLN2	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.565
B0A48_01931	B0A48_14609	A0A1V8TR45	A0A1V8SL79	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	0.982
B0A48_01931	B0A48_14764	A0A1V8TR45	A0A1V8SKG4	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.574
B0A48_01931	B0A48_16077	A0A1V8TR45	A0A1V8SF38	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.961
B0A48_01931	B0A48_16568	A0A1V8TR45	A0A1V8SEB0	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.693
B0A48_03316	B0A48_00058	A0A1V8TJN8	A0A1V8TTN1	HEM4 domain-containing protein.	Uncharacterized protein.	0.991
B0A48_03316	B0A48_01931	A0A1V8TJN8	A0A1V8TR45	HEM4 domain-containing protein.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.598

page 1 of 5

Network Stats

number of nodes:

2

number of edges:

1

average node degree:

1

avg. local clustering coefficient:

1

expected number of edges:

1

PPI enrichment p-value:

0.5

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006259

DNA metabolic process

6 of 85

1.16

0.97

0.0014

GO:0042823

Pyridoxal phosphate biosynthetic process

2 of 2

2.31

0.91

0.0208

GO:0006265

DNA topological change

2 of 3

2.14

0.88

0.0230

GO:0006281

DNA repair

3 of 35

1.24

0.61

0.0425

GO:0046483

Heterocycle metabolic process

9 of 379

0.69

0.53

0.0022

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0043590

Bacterial nucleoid

2 of 3

2.14

0.89

0.0222

GO:0043232

Intracellular non-membrane-bounded organelle

4 of 76

1.03

0.61

0.0222

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:858

Amine-lyase activity, and DNA topoisomerase, type IIA-like domain superfamily

6 of 6

2.31

4.37

1.14e-09

CL:554

Catalytic activity, acting on DNA, and Nucleoid

3 of 26

1.37

0.67

0.0366

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03440

Homologous recombination

4 of 22

1.57

1.44

0.00047

map00750

Vitamin B6 metabolism

2 of 4

2.01

0.93

0.0174

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0043590

Bacterial nucleoid

3 of 5

2.09

1.56

0.00094

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0235

DNA replication

3 of 12

1.71

1.08

0.0062

KW-0799

Topoisomerase

2 of 3

2.14

1.03

0.0116

KW-0704

Schiff base

2 of 4

2.01

1.02

0.0116

KW-0233

DNA recombination

2 of 7

1.77

0.89

0.0174

KW-0234

DNA repair

3 of 24

1.41

0.87

0.0116

(more ...)

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