STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_16140Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (402 aa)    
Predicted Functional Partners:
B0A48_07379
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
B0A48_05737
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
B0A48_12643
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.973
B0A48_06905
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.973
B0A48_17228
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.922
B0A48_15795
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.922
B0A48_17475
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.917
B0A48_11201
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.917
B0A48_05334
2-oxoglutarate dehydrogenase, mitochondrial.
   
 0.915
B0A48_01673
2-oxoglutarate dehydrogenase, mitochondrial.
   
 0.915
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.