STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_16253Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
B0A48_15205
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.822
B0A48_03019
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.822
B0A48_13486
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.690
B0A48_11362
Elongation factor 1-alpha.
   
 0.690
B0A48_11363
Tr-type G domain-containing protein.
   
 0.690
B0A48_18199
Uncharacterized protein.
   
 
 0.686
B0A48_11927
Uncharacterized protein.
   
 
 0.686
B0A48_16052
RPOLD domain-containing protein.
   
 
 0.609
B0A48_13838
RPOLD domain-containing protein.
   
 
 0.609
B0A48_06438
RPOLD domain-containing protein.
   
 
 0.609
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.