STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_15482Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (386 aa)    
Predicted Functional Partners:
B0A48_13476
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.784
B0A48_11805
Fn3_like domain-containing protein.
    
  0.784
B0A48_11349
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.784
B0A48_07597
Fn3_like domain-containing protein.
    
  0.784
B0A48_12728
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.643
B0A48_08388
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.643
B0A48_06815
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.643
B0A48_04238
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.643
B0A48_07972
Lysophospholipase.
    
  0.526
B0A48_02720
Lysophospholipase.
    
  0.526
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.