STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_14497Uncharacterized protein. (658 aa)    
Predicted Functional Partners:
B0A48_00216
Uncharacterized protein.
    
 0.865
B0A48_11880
SH3 domain-containing protein.
    
 0.798
B0A48_07531
SH3 domain-containing protein.
    
 0.798
B0A48_12869
Uncharacterized protein.
    
  0.777
B0A48_12741
Uncharacterized protein.
    
  0.777
B0A48_09342
BRO1 domain-containing protein.
    
  0.777
B0A48_06803
Uncharacterized protein.
    
  0.777
B0A48_05683
Uncharacterized protein.
    
 0.777
B0A48_03976
Uncharacterized protein.
    
  0.777
B0A48_14264
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.733
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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