STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_13685Alpha-mann_mid domain-containing protein. (1099 aa)    
Predicted Functional Partners:
B0A48_04809
RING-type domain-containing protein.
     
 0.892
B0A48_16226
Uncharacterized protein.
   
 
 0.753
B0A48_15884
Uncharacterized protein.
   
 
 0.753
B0A48_15594
Uncharacterized protein.
   
  
 0.612
B0A48_15403
Uncharacterized protein.
   
  
 0.612
B0A48_06201
Uncharacterized protein.
   
  
 0.611
B0A48_06005
Uncharacterized protein.
   
  
 0.611
B0A48_00901
Uncharacterized protein.
   
 
 0.592
B0A48_00682
Uncharacterized protein.
   
 
 0.592
B0A48_07088
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
   
 
 0.565
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.