B0A48_13593 protein (Rachicladosporium antarcticum)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A48_13593

Uncharacterized protein. (790 aa)

Predicted Functional Partners:

B0A48_16526

0.860

B0A48_11773

0.860

B0A48_10065

0.860

B0A48_08416

0.860

B0A48_07636

0.860

B0A48_04377

0.860

B0A48_11998

0.858

B0A48_09229

0.858

B0A48_14791

0.856

B0A48_14165

0.856

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_04377	B0A48_07636	A0A1V8TFK1	A0A1V8T6U7	Uncharacterized protein.	Uncharacterized protein.	0.984
B0A48_04377	B0A48_09229	A0A1V8TFK1	A0A1V8T2A5	Uncharacterized protein.	Uncharacterized protein.	0.987
B0A48_04377	B0A48_10065	A0A1V8TFK1	A0A1V8T3R9	Uncharacterized protein.	Uncharacterized protein.	0.844
B0A48_04377	B0A48_11773	A0A1V8TFK1	A0A1V8ST30	Uncharacterized protein.	Uncharacterized protein.	0.984
B0A48_04377	B0A48_11998	A0A1V8TFK1	A0A1V8STX0	Uncharacterized protein.	Uncharacterized protein.	0.987
B0A48_04377	B0A48_13593	A0A1V8TFK1	A0A1V8SPD2	Uncharacterized protein.	Uncharacterized protein.	0.860
B0A48_04377	B0A48_14165	A0A1V8TFK1	A0A1V8SLY1	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
B0A48_04377	B0A48_14791	A0A1V8TFK1	A0A1V8SKP3	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
B0A48_04377	B0A48_16526	A0A1V8TFK1	A0A1V8SES8	Uncharacterized protein.	Uncharacterized protein.	0.844
B0A48_07636	B0A48_04377	A0A1V8T6U7	A0A1V8TFK1	Uncharacterized protein.	Uncharacterized protein.	0.984
B0A48_07636	B0A48_08416	A0A1V8T6U7	A0A1V8T5N5	Uncharacterized protein.	Uncharacterized protein.	0.984
B0A48_07636	B0A48_09229	A0A1V8T6U7	A0A1V8T2A5	Uncharacterized protein.	Uncharacterized protein.	0.937
B0A48_07636	B0A48_10065	A0A1V8T6U7	A0A1V8T3R9	Uncharacterized protein.	Uncharacterized protein.	0.961
B0A48_07636	B0A48_11998	A0A1V8T6U7	A0A1V8STX0	Uncharacterized protein.	Uncharacterized protein.	0.937
B0A48_07636	B0A48_13593	A0A1V8T6U7	A0A1V8SPD2	Uncharacterized protein.	Uncharacterized protein.	0.860
B0A48_07636	B0A48_14165	A0A1V8T6U7	A0A1V8SLY1	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.959
B0A48_07636	B0A48_14791	A0A1V8T6U7	A0A1V8SKP3	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.959
B0A48_07636	B0A48_16526	A0A1V8T6U7	A0A1V8SES8	Uncharacterized protein.	Uncharacterized protein.	0.961
B0A48_08416	B0A48_07636	A0A1V8T5N5	A0A1V8T6U7	Uncharacterized protein.	Uncharacterized protein.	0.984
B0A48_08416	B0A48_09229	A0A1V8T5N5	A0A1V8T2A5	Uncharacterized protein.	Uncharacterized protein.	0.987

page 1 of 5

Network Stats

number of nodes:

11

number of edges:

30

average node degree:

5.45

avg. local clustering coefficient:

0.822

expected number of edges:

11

PPI enrichment p-value:

2.3e-06

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0050464

Nitrate reductase (NADPH) activity

2 of 2

2.91

1.31

0.0043

GO:0003735

Structural constituent of ribosome

5 of 152

1.42

1.21

0.0011

GO:0043546

Molybdopterin cofactor binding

2 of 5

2.51

1.2

0.0064

GO:0030151

Molybdenum ion binding

2 of 8

2.31

1.07

0.0107

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005763

Mitochondrial small ribosomal subunit

5 of 29

2.14

3.21

2.26e-07

GO:0005576

Extracellular region

4 of 293

1.04

0.61

0.0251

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4710

Organellar ribosome, and Plant-pathogen interaction

6 of 53

1.96

3.24

4.74e-08

CL:8987

Eukaryotic molybdopterin oxidoreductase, and Electron transport from NADPH to Ferredoxin

4 of 11

2.47

3.22

6.89e-07

CL:4769

Organellar small ribosomal subunit, and CTP metabolic process

4 of 14

2.36

3.04

1.23e-06

CL:8990

Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor, and Eukaryotic molybdopterin oxidoreductase

3 of 5

2.69

2.67

1.15e-05

CL:4772

Organellar small ribosomal subunit, and Ribosomal protein S10

3 of 9

2.43

2.34

3.81e-05

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03010

Ribosome

5 of 168

1.38

1.39

0.00017

map00910

Nitrogen metabolism

3 of 46

1.72

1.3

0.0019

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-72766

Translation

5 of 252

1.21

0.83

0.0072

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005763

Mitochondrial small ribosomal subunit

4 of 26

2.09

2.24

3.26e-05

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0274

FAD

3 of 63

1.59

0.89

0.0143

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03404

Mo-co oxidoreductase dimerisation domain

4 of 6

2.73

3.54

2.55e-07

PF00174

Oxidoreductase molybdopterin binding domain

4 of 7

2.66

3.52

2.55e-07

PF00970

Oxidoreductase FAD-binding domain

3 of 9

2.43

2.13

9.87e-05

PF00175

Oxidoreductase NAD-binding domain

3 of 16

2.18

1.81

0.00032

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR008335

Eukaryotic molybdopterin oxidoreductase

4 of 6

2.73

3.31

7.19e-07

IPR005066

Moybdenum cofactor oxidoreductase, dimerisation

4 of 6

2.73

3.31

7.19e-07

IPR000572

Oxidoreductase, molybdopterin-binding domain

4 of 6

2.73

3.31

7.19e-07

IPR036374

Oxidoreductase, molybdopterin-binding domain superfamily

4 of 7

2.66

3.29

7.19e-07

IPR014756

Immunoglobulin E-set

4 of 24

2.13

2.42

1.39e-05

(more ...)

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