B0A48_07572 protein (Rachicladosporium antarcticum)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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protein homology

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Score

B0A48_07572

L51_S25_CI-B8 domain-containing protein. (94 aa)

Predicted Functional Partners:

B0A48_18333

0.999

B0A48_18417

0.999

B0A48_17601

0.999

B0A48_17833

0.999

B0A48_17346

0.999

B0A48_16911

0.999

B0A48_16358

0.999

B0A48_16051

0.999

B0A48_15505

0.999

B0A48_15134

0.999

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_07572	B0A48_15134	A0A1V8STD8	A0A1V8SJG7	L51_S25_CI-B8 domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.999
B0A48_07572	B0A48_15505	A0A1V8STD8	A0A1V8SGM3	L51_S25_CI-B8 domain-containing protein.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.999
B0A48_07572	B0A48_16051	A0A1V8STD8	A0A1V8SFH6	L51_S25_CI-B8 domain-containing protein.	NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family.	0.999
B0A48_07572	B0A48_16358	A0A1V8STD8	A0A1V8SDN4	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.999
B0A48_07572	B0A48_16911	A0A1V8STD8	A0A1V8SD17	L51_S25_CI-B8 domain-containing protein.	NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.	0.999
B0A48_07572	B0A48_17346	A0A1V8STD8	A0A1V8SCB2	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.999
B0A48_07572	B0A48_17601	A0A1V8STD8	A0A1V8SB12	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.999
B0A48_07572	B0A48_17833	A0A1V8STD8	A0A1V8SBS9	L51_S25_CI-B8 domain-containing protein.	Helo_like_N domain-containing protein.	0.999
B0A48_07572	B0A48_18333	A0A1V8STD8	A0A1V8S8K9	L51_S25_CI-B8 domain-containing protein.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.999
B0A48_07572	B0A48_18417	A0A1V8STD8	A0A1V8S9E1	L51_S25_CI-B8 domain-containing protein.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.999
B0A48_15134	B0A48_07572	A0A1V8SJG7	A0A1V8STD8	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	L51_S25_CI-B8 domain-containing protein.	0.999
B0A48_15134	B0A48_15505	A0A1V8SJG7	A0A1V8SGM3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.993
B0A48_15134	B0A48_16051	A0A1V8SJG7	A0A1V8SFH6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family.	0.990
B0A48_15134	B0A48_16358	A0A1V8SJG7	A0A1V8SDN4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.996
B0A48_15134	B0A48_16911	A0A1V8SJG7	A0A1V8SD17	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.	0.993
B0A48_15134	B0A48_17346	A0A1V8SJG7	A0A1V8SCB2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.985
B0A48_15134	B0A48_17601	A0A1V8SJG7	A0A1V8SB12	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.985
B0A48_15134	B0A48_17833	A0A1V8SJG7	A0A1V8SBS9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Helo_like_N domain-containing protein.	0.984
B0A48_15134	B0A48_18333	A0A1V8SJG7	A0A1V8S8K9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.996
B0A48_15134	B0A48_18417	A0A1V8SJG7	A0A1V8S9E1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.993

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Network Stats

number of nodes:

11

number of edges:

19

average node degree:

3.45

avg. local clustering coefficient:

0.859

expected number of edges:

11

PPI enrichment p-value:

0.0245

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0043565

Sequence-specific DNA binding

5 of 24

1.64

1.82

4.95e-05

GO:0003700

DNA-binding transcription factor activity

5 of 49

1.33

1.2

0.00062

GO:0003677

DNA binding

7 of 184

0.9

0.77

0.00075

GO:1901363

Heterocyclic compound binding

9 of 646

0.47

0.32

0.0295

GO:0097159

Organic cyclic compound binding

9 of 646

0.47

0.32

0.0295

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4137

Transcription regulator HTH, AraC- type, and Berberine/berberine-like

6 of 11

2.06

3.59

1.34e-08

CL:4139

HTH domain AraC-type, conserved site, and SnoaL-like domain

5 of 6

2.24

3.46

9.73e-08

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0804

Transcription

6 of 66

1.28

1.38

5.30e-05

KW-0805

Transcription regulation

5 of 62

1.23

1.1

0.00063

KW-0238

DNA-binding

5 of 104

1.01

0.74

0.0046

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR020449

Transcription regulator HTH, AraC- type

5 of 8

2.12

2.91

1.01e-06

IPR018060

DNA binding HTH domain, AraC-type

5 of 10

2.02

2.79

1.17e-06

IPR018062

HTH domain AraC-type, conserved site

4 of 6

2.15

2.44

1.37e-05

IPR009057

Homeobox-like domain superfamily

5 of 18

1.77

2.2

8.59e-06

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00342

Helix_turn_helix, arabinose operon control protein

5 of 10

2.02

3.1

1.89e-07

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