STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_11131SGL domain-containing protein. (423 aa)    
Predicted Functional Partners:
B0A48_16241
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.690
B0A48_01911
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.690
B0A48_13942
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
   
 0.662
B0A48_04934
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
   
 0.662
B0A48_02780
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
  
 0.643
B0A48_03048
Uncharacterized protein.
   
  
 0.643
B0A48_14082
RNase_PH domain-containing protein.
   
 
 0.639
B0A48_11826
Uncharacterized protein.
   
 
 0.631
B0A48_07843
RNB domain-containing protein.
   
 
 0.631
B0A48_08004
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 
 0.631
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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