STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_11267Chorismate synthase. (713 aa)    
Predicted Functional Partners:
B0A48_06684
Prephenate/arogenate dehydrogenase domain-containing protein.
  
 0.978
B0A48_03870
Prephenate/arogenate dehydrogenase domain-containing protein.
  
 0.978
B0A48_16366
Uncharacterized protein.
  
 
 0.969
B0A48_04856
Uncharacterized protein.
  
 
 0.969
B0A48_06168
Tryptophan synthase.
  
  
 0.967
B0A48_06083
Tryptophan synthase.
  
  
 0.967
B0A48_08418
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.953
B0A48_04379
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.953
B0A48_15200
Uncharacterized protein.
  
 
 0.935
B0A48_03009
Uncharacterized protein.
  
 
 0.935
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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