STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_11621Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1344 aa)    
Predicted Functional Partners:
B0A48_14797
Uncharacterized protein; Belongs to the CDC50/LEM3 family.
   
 0.817
B0A48_14158
Uncharacterized protein; Belongs to the CDC50/LEM3 family.
   
 0.817
B0A48_16145
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.792
B0A48_15962
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.792
B0A48_17939
Uncharacterized protein.
   
 0.790
B0A48_15304
SWIRM domain-containing protein.
   
 0.790
B0A48_14654
SWIRM domain-containing protein.
   
 0.790
B0A48_14735
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.747
B0A48_14221
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.747
B0A48_02243
Phosphodiesterase.
   
 
  0.735
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.