STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_10123Fcf2 domain-containing protein. (223 aa)    
Predicted Functional Partners:
B0A48_12388
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.986
B0A48_03472
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.986
B0A48_07840
Sas10 domain-containing protein.
   
 
 0.985
B0A48_02637
Sas10 domain-containing protein.
   
 
 0.985
B0A48_14853
Uncharacterized protein.
   
   0.984
B0A48_12369
Uncharacterized protein.
   
 
 0.984
B0A48_11070
Uncharacterized protein.
   
   0.984
B0A48_09004
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
   0.984
B0A48_04516
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.984
B0A48_03493
Uncharacterized protein.
   
 
 0.984
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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