STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_10267Uracil phosphoribosyltransferase. (249 aa)    
Predicted Functional Partners:
B0A48_05683
Uncharacterized protein.
    
 0.995
B0A48_09557
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.961
B0A48_14457
Uncharacterized protein.
    
 0.928
B0A48_13761
Uncharacterized protein.
    
 0.928
B0A48_15420
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.888
B0A48_18003
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
   
 0.862
B0A48_09898
OMPdecase domain-containing protein.
   
 0.862
B0A48_16701
IU_nuc_hydro domain-containing protein.
   
 0.844
B0A48_11593
IU_nuc_hydro domain-containing protein.
   
 0.844
B0A48_07052
Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
    
 0.836
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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