STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_09378D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (475 aa)    
Predicted Functional Partners:
B0A48_14810
Uncharacterized protein.
 
 0.978
B0A48_14143
Aminotran_5 domain-containing protein.
 
 0.978
B0A48_06168
Tryptophan synthase.
  
 0.925
B0A48_06083
Tryptophan synthase.
  
 0.925
B0A48_17119
Uncharacterized protein.
    
 0.808
B0A48_14676
Uncharacterized protein.
    
 0.808
B0A48_14281
Uncharacterized protein.
    
 0.808
B0A48_13241
Uncharacterized protein.
    
 0.808
B0A48_11314
Uncharacterized protein.
    
 0.808
B0A48_09014
Uncharacterized protein.
    
 0.808
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.