STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_11001Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (350 aa)    
Predicted Functional Partners:
B0A48_10540
Uncharacterized protein.
  
 
 0.999
B0A48_09001
60S ribosomal protein L31.
   
 0.999
B0A48_12276
60S ribosomal protein L30.
   
  0.998
B0A48_04469
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.998
B0A48_00412
60S ribosomal protein L34-B.
  
 0.998
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.997
B0A48_08945
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.997
B0A48_05787
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.997
B0A48_02004
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.997
B0A48_10505
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.996
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.