STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_09493Uncharacterized protein. (1670 aa)    
Predicted Functional Partners:
B0A48_05397
Uncharacterized protein.
    
 
 0.972
B0A48_01736
Uncharacterized protein.
    
 
 0.972
B0A48_14553
Uncharacterized protein.
   
 
 0.954
B0A48_05561
Uncharacterized protein.
   
 
 0.954
B0A48_07949
Uncharacterized protein.
    
 
 0.934
B0A48_02739
Uncharacterized protein.
    
 
 0.934
B0A48_16803
Uncharacterized protein.
    
 
 0.933
B0A48_14337
Uncharacterized protein.
    
 
 0.933
B0A48_12430
PCI domain-containing protein.
   
 
 0.909
B0A48_03558
PCI domain-containing protein.
   
 
 0.909
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.