STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_09708Brix domain-containing protein. (406 aa)    
Predicted Functional Partners:
B0A48_16646
Ribosome biogenesis protein RLP24.
   
 
 0.997
B0A48_00724
Uncharacterized protein.
   
 
 0.997
B0A48_14944
RRM domain-containing protein.
   
 
 0.996
B0A48_11158
RRM domain-containing protein.
   
 
 0.996
B0A48_04346
Uncharacterized protein.
   
 
 0.995
B0A48_14742
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.992
B0A48_14214
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.992
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.989
B0A48_09001
60S ribosomal protein L31.
   
 
 0.986
B0A48_04469
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.986
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
Server load: low (14%) [HD]