STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_08100Uncharacterized protein; Belongs to the peptidase S8 family. (898 aa)    
Predicted Functional Partners:
B0A48_10337
3'-5' exonuclease domain-containing protein.
    
 0.717
B0A48_09516
3'-5' exonuclease domain-containing protein.
    
 0.717
B0A48_07170
3'-5' exonuclease domain-containing protein.
    
 0.717
B0A48_05899
3'-5' exonuclease domain-containing protein.
    
 0.717
B0A48_16550
Telo_bind domain-containing protein.
    
 0.706
B0A48_00038
Telo_bind domain-containing protein.
    
 0.706
B0A48_12466
AAA_15 domain-containing protein.
    
 0.660
B0A48_03597
AAA_23 domain-containing protein.
    
 0.660
B0A48_18048
FHA domain-containing protein.
    
  0.646
B0A48_02171
FHA domain-containing protein.
    
  0.646
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.