B0A48_09803 protein (Rachicladosporium antarcticum)

Nodes:

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second shell of interactors

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filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

B0A48_09803

Uncharacterized protein. (658 aa)

Predicted Functional Partners:

B0A48_11161

0.999

B0A48_10298

0.994

B0A48_09476

0.994

B0A48_02662

0.994

B0A48_05329

0.983

B0A48_13119

0.955

B0A48_11673

0.882

B0A48_07731

0.882

B0A48_05421

0.881

B0A48_01643

0.881

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_01643	B0A48_05421	A0A1V8TPY7	A0A1V8TIF9	HECT domain-containing protein.	HECT domain-containing protein.	0.790
B0A48_01643	B0A48_09476	A0A1V8TPY7	A0A1V8SZQ2	HECT domain-containing protein.	ThiF domain-containing protein.	0.871
B0A48_01643	B0A48_09803	A0A1V8TPY7	A0A1V8T2Z4	HECT domain-containing protein.	Uncharacterized protein.	0.881
B0A48_01643	B0A48_10298	A0A1V8TPY7	A0A1V8SWU9	HECT domain-containing protein.	ThiF domain-containing protein.	0.871
B0A48_01643	B0A48_11161	A0A1V8TPY7	A0A1V8SV52	HECT domain-containing protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.930
B0A48_02662	B0A48_07731	A0A1V8T0B2	A0A1V8T6Y2	Ubiquitin-like domain-containing protein.	NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.	0.478
B0A48_02662	B0A48_09476	A0A1V8T0B2	A0A1V8SZQ2	Ubiquitin-like domain-containing protein.	ThiF domain-containing protein.	0.984
B0A48_02662	B0A48_09803	A0A1V8T0B2	A0A1V8T2Z4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.994
B0A48_02662	B0A48_10298	A0A1V8T0B2	A0A1V8SWU9	Ubiquitin-like domain-containing protein.	ThiF domain-containing protein.	0.984
B0A48_02662	B0A48_11161	A0A1V8T0B2	A0A1V8SV52	Ubiquitin-like domain-containing protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.999
B0A48_02662	B0A48_11673	A0A1V8T0B2	A0A1V8SSX9	Ubiquitin-like domain-containing protein.	NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.	0.478
B0A48_05329	B0A48_07731	A0A1V8TIF5	A0A1V8T6Y2	Uncharacterized protein.	NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.	0.478
B0A48_05329	B0A48_09476	A0A1V8TIF5	A0A1V8SZQ2	Uncharacterized protein.	ThiF domain-containing protein.	0.984
B0A48_05329	B0A48_09803	A0A1V8TIF5	A0A1V8T2Z4	Uncharacterized protein.	Uncharacterized protein.	0.983
B0A48_05329	B0A48_10298	A0A1V8TIF5	A0A1V8SWU9	Uncharacterized protein.	ThiF domain-containing protein.	0.984
B0A48_05329	B0A48_11161	A0A1V8TIF5	A0A1V8SV52	Uncharacterized protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.999
B0A48_05329	B0A48_11673	A0A1V8TIF5	A0A1V8SSX9	Uncharacterized protein.	NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.	0.478
B0A48_05421	B0A48_01643	A0A1V8TIF9	A0A1V8TPY7	HECT domain-containing protein.	HECT domain-containing protein.	0.790
B0A48_05421	B0A48_09476	A0A1V8TIF9	A0A1V8SZQ2	HECT domain-containing protein.	ThiF domain-containing protein.	0.871
B0A48_05421	B0A48_09803	A0A1V8TIF9	A0A1V8T2Z4	HECT domain-containing protein.	Uncharacterized protein.	0.881

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Network Stats

number of nodes:

8

number of edges:

11

average node degree:

2.75

avg. local clustering coefficient:

0.899

expected number of edges:

11

PPI enrichment p-value:

0.482

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0045471

Response to ethanol

2 of 3

2.92

0.94

0.0198

GO:0006636

Unsaturated fatty acid biosynthetic process

2 of 7

2.55

0.86

0.0277

GO:0000001

Mitochondrion inheritance

2 of 8

2.5

0.86

0.0277

GO:0042128

Nitrate assimilation

2 of 9

2.45

0.85

0.0277

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0050464

Nitrate reductase (NADPH) activity

2 of 2

3.1

1.26

0.0053

GO:0004768

stearoyl-CoA 9-desaturase activity

2 of 2

3.1

1.26

0.0053

GO:0043546

Molybdopterin cofactor binding

2 of 7

2.55

1.24

0.0053

GO:0030151

Molybdenum ion binding

2 of 11

2.36

1.17

0.0069

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:11839

Nitrate reductase activity

2 of 6

2.62

0.93

0.0209

CL:11412

Mixed, incl. Ribonucleoside-diphosphate reductase complex, and GDP metabolic process

2 of 6

2.62

0.93

0.0209

CL:10176

Acyl-CoA desaturase, and Fatty acid elongation

2 of 5

2.7

0.93

0.0209

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0349

Heme

4 of 61

1.92

2.11

3.44e-05

KW-0275

Fatty acid biosynthesis

2 of 12

2.32

1.35

0.0031

KW-0249

Electron transport

2 of 15

2.22

1.33

0.0031

KW-0560

Oxidoreductase

4 of 253

1.3

1.0

0.0028

KW-0479

Metal-binding

5 of 717

0.94

0.69

0.0047

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03404

Mo-co oxidoreductase dimerisation domain

2 of 3

2.92

1.21

0.0064

PF00174

Oxidoreductase molybdopterin binding domain

2 of 4

2.8

1.21

0.0064

PF00487

Fatty acid desaturase

2 of 13

2.29

0.9

0.0222

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR001199

Cytochrome b5-like heme/steroid binding domain

4 of 38

2.12

2.09

7.36e-05

IPR036400

Cytochrome b5-like heme/steroid binding domain superfamily

4 of 40

2.1

2.08

7.36e-05

IPR018506

Cytochrome b5, heme-binding site

3 of 15

2.4

1.87

0.00031

IPR015876

Acyl-CoA desaturase

2 of 2

3.1

1.43

0.0026

IPR009160

Acyl-CoA desaturase, haem/steroid binding domain-containing

2 of 2

3.1

1.43

0.0026

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01117

Cytochrome b5-like Heme/Steroid binding domain

4 of 38

2.12

2.52

8.10e-06

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