STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_08603Uncharacterized protein. (2517 aa)    
Predicted Functional Partners:
B0A48_15873
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.914
B0A48_14988
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.824
B0A48_03260
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.824
B0A48_11748
C2H2-type domain-containing protein.
     
 0.797
B0A48_07655
C2H2-type domain-containing protein.
     
 0.797
B0A48_10164
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.778
B0A48_09430
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.778
B0A48_03489
Uncharacterized protein.
    
 0.676
B0A48_07966
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
  
  
  0.631
B0A48_02714
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
  
  
  0.631
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.