STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_08606Mannan endo-1,6-alpha-mannosidase. (458 aa)    
Predicted Functional Partners:
B0A48_11018
Uncharacterized protein.
    
 0.800
B0A48_08689
Uncharacterized protein.
    
 0.800
B0A48_10626
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.787
B0A48_01506
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.787
B0A48_06398
Sphingolipid long chain base-responsive protein PIL1.
  
 
   0.601
B0A48_02366
Sphingolipid long chain base-responsive protein PIL1.
  
 
   0.601
B0A48_07372
Protein kinase domain-containing protein.
    
 
 0.571
B0A48_05744
Protein kinase domain-containing protein.
    
 
 0.571
B0A48_14991
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.489
B0A48_03264
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.489
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.