STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_08449FAA_hydrolase domain-containing protein. (295 aa)    
Predicted Functional Partners:
B0A48_15165
Homogentisate 1,2-dioxygenase.
  
 
 0.705
B0A48_02972
Homogentisate 1,2-dioxygenase.
  
 
 0.705
B0A48_12033
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.595
B0A48_09114
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.595
B0A48_02525
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.522
B0A48_11715
Malate synthase; Belongs to the malate synthase family.
    
 0.516
B0A48_07689
Malate synthase; Belongs to the malate synthase family.
    
 0.516
B0A48_17987
Pyruvate carboxyltransferase domain-containing protein.
    
  0.505
B0A48_18352
Pyruvate carboxyltransferase domain-containing protein.
    
  0.505
B0A48_09881
Pyruvate carboxyltransferase domain-containing protein.
    
  0.505
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.