STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_074043Beta_HSD domain-containing protein. (371 aa)    
Predicted Functional Partners:
B0A48_12820
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.957
B0A48_03923
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.957
B0A48_07410
Eburicol 14-alpha-demethylase; Belongs to the cytochrome P450 family.
   
 0.949
B0A48_05706
Eburicol 14-alpha-demethylase; Belongs to the cytochrome P450 family.
   
 0.949
B0A48_16252
SE domain-containing protein.
   
 
 0.931
B0A48_01921
SE domain-containing protein.
   
 
 0.931
B0A48_06427
Uncharacterized protein.
   
 
 0.928
B0A48_02335
Uncharacterized protein.
   
 
 0.928
B0A48_10368
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.921
B0A48_09547
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.921
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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