STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_06813Uncharacterized protein. (534 aa)    
Predicted Functional Partners:
B0A48_18186
C3H1-type domain-containing protein.
   
 0.894
B0A48_16832
C3H1-type domain-containing protein.
   
 0.894
B0A48_16900
AMPK1_CBM domain-containing protein.
   
 0.894
B0A48_10197
AMPKBI domain-containing protein.
   
 0.894
B0A48_09396
AMPKBI domain-containing protein; Belongs to the cytochrome P450 family.
   
 0.894
B0A48_06168
Tryptophan synthase.
  
 
 0.874
B0A48_06083
Tryptophan synthase.
  
 
 0.874
B0A48_05683
Uncharacterized protein.
   
 0.863
B0A48_08418
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.851
B0A48_04379
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.851
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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