STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_06892WSC domain-containing protein. (302 aa)    
Predicted Functional Partners:
B0A48_17774
Uncharacterized protein.
    
 0.927
B0A48_15838
Uncharacterized protein.
    
 0.927
B0A48_03184
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.728
B0A48_03726
Nuclear transport factor 2.
    
 0.706
B0A48_16040
Uncharacterized protein.
   
 0.670
B0A48_15311
Uncharacterized protein.
   
 0.670
B0A48_14661
Uncharacterized protein.
   
 0.670
B0A48_13849
Uncharacterized protein.
   
 0.670
B0A48_16743
Nuclear protein localization protein 4.
    
 0.644
B0A48_14351
Nuclear protein localization protein 4.
    
 0.644
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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