STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_06997Uncharacterized protein. (566 aa)    
Predicted Functional Partners:
B0A48_05683
Uncharacterized protein.
   
 0.936
B0A48_11161
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.495
B0A48_10175
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.478
B0A48_09419
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.478
B0A48_01027
26S proteasome regulatory subunit rpn11.
    
  0.463
B0A48_00437
26S proteasome regulatory subunit rpn11.
    
  0.463
B0A48_12613
Uncharacterized protein.
    
  0.461
B0A48_12612
Putative urea carboxylase.
    
  0.461
B0A48_06929
Putative urea carboxylase.
    
  0.461
B0A48_06930
Uncharacterized protein.
    
  0.461
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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