STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_05977Arrestin_C domain-containing protein. (790 aa)    
Predicted Functional Partners:
B0A48_13527
Uncharacterized protein.
    
 
 0.733
B0A48_11403
Uncharacterized protein.
    
 
 0.733
B0A48_18242
Uncharacterized protein.
    
 
 0.637
B0A48_04216
Uncharacterized protein.
    
 
 0.637
B0A48_00223
Uncharacterized protein.
  
 
 
 0.634
B0A48_01032
Uncharacterized protein.
  
 
 
 0.633
B0A48_12196
BRO1 domain-containing protein.
    
 
 0.576
B0A48_11952
BRO1 domain-containing protein.
    
 
 0.575
B0A48_09064
BRO1 domain-containing protein.
    
 
 0.575
B0A48_12635
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
    
 
 0.570
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.