STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_06075Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
B0A48_10784
C3H1-type domain-containing protein.
    
 
 0.983
B0A48_06705
Uncharacterized protein.
    
 
 0.669
B0A48_03889
Uncharacterized protein.
    
 
 0.669
B0A48_05464
Uncharacterized protein.
    
   0.645
B0A48_01605
Uncharacterized protein.
    
   0.645
B0A48_14429
Tr-type G domain-containing protein.
    
 
 0.619
B0A48_13730
Tr-type G domain-containing protein.
    
 
 0.619
B0A48_12652
Uncharacterized protein.
    
 
 0.534
B0A48_06893
Uncharacterized protein.
    
 
 0.534
B0A48_12573
Uncharacterized protein.
   
  
 0.484
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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