STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_04740Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
B0A48_15420
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.890
B0A48_06722
Phosphoglucomutase; Belongs to the phosphohexose mutase family.
  
 
 0.864
B0A48_04080
Phosphoglucomutase; Belongs to the phosphohexose mutase family.
  
 
 0.864
B0A48_14987
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
   
 
 0.862
B0A48_03259
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
   
 
 0.862
B0A48_18056
Putative D-xylulose kinase A.
    
 0.859
B0A48_02160
Putative D-xylulose kinase A.
    
 0.859
B0A48_11989
Putative ribose 5-phosphate isomerase.
     
 0.845
B0A48_09220
Uncharacterized protein.
     
 0.845
B0A48_11019
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.823
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.