STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_04970Ammonium transporter. (490 aa)    
Predicted Functional Partners:
B0A48_18055
Uncharacterized protein.
   
  
 0.505
B0A48_17523
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  
 0.505
B0A48_07810
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  
 0.505
B0A48_02161
Uncharacterized protein.
   
  
 0.505
B0A48_02494
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  
 0.505
B0A48_16891
Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.490
B0A48_07437
Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.490
B0A48_05589
Histone H3; Belongs to the histone H3 family.
   
  
 0.448
B0A48_10293
Histone H3-like centromeric protein hH3v.
   
  
 0.448
B0A48_09471
Histone domain-containing protein.
   
  
 0.448
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.