STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_05123CN hydrolase domain-containing protein. (384 aa)    
Predicted Functional Partners:
B0A48_13429
CN hydrolase domain-containing protein.
  
  
  0.883
B0A48_12613
Uncharacterized protein.
   
 0.842
B0A48_12612
Putative urea carboxylase.
   
 0.842
B0A48_06929
Putative urea carboxylase.
   
 0.842
B0A48_06930
Uncharacterized protein.
   
 0.842
B0A48_17524
Nitrite reductase [NAD(P)H].
   
 
 0.837
B0A48_07811
Nitrite reductase [NAD(P)H].
   
 
 0.837
B0A48_16935
CN hydrolase domain-containing protein.
  
  
 
0.823
B0A48_10242
Arylacetonitrilase.
  
  
 
0.821
B0A48_09680
CN hydrolase domain-containing protein.
  
  
 
0.821
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.