STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_04371Homeobox domain-containing protein. (544 aa)    
Predicted Functional Partners:
B0A48_07445
MADS-box domain-containing protein.
    
 0.935
B0A48_10837
BHLH domain-containing protein.
    
 0.736
B0A48_08874
BHLH domain-containing protein.
    
 0.736
B0A48_09587
Fork-head domain-containing protein.
   
 
 0.673
B0A48_15170
Uncharacterized protein.
    
 0.654
B0A48_02978
Uncharacterized protein.
    
 0.654
B0A48_08153
Uncharacterized protein.
    
  0.562
B0A48_02821
Uncharacterized protein.
    
  0.562
B0A48_16420
Uncharacterized protein.
    
 0.553
B0A48_14379
Uncharacterized protein.
    
 0.553
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.