STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_04396Uncharacterized protein. (525 aa)    
Predicted Functional Partners:
B0A48_16297
Uncharacterized protein.
  
  
  0.469
B0A48_01974
Uncharacterized protein.
  
  
  0.461
B0A48_14870
Guanylate kinase-like domain-containing protein.
    
  0.450
B0A48_11958
GRIP domain-containing protein.
    
  0.450
B0A48_11086
Guanylate kinase-like domain-containing protein.
    
  0.450
B0A48_11332
Uncharacterized protein.
    
  0.450
B0A48_08992
Uncharacterized protein.
    
  0.450
B0A48_09070
GRIP domain-containing protein.
    
  0.450
B0A48_03152
Uncharacterized protein.
  
     0.439
B0A48_08168
Uncharacterized protein.
  
     0.432
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.