B0A48_04135 protein (Rachicladosporium antarcticum)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

B0A48_04135

ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. (204 aa)

Predicted Functional Partners:

B0A48_05683

0.985

B0A48_11906

0.980

B0A48_07506

0.980

B0A48_17701

0.971

B0A48_14004

0.923

B0A48_04793

0.923

B0A48_11737

0.915

B0A48_07666

0.915

B0A48_03999

0.905

B0A48_00631

0.905

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_00631	B0A48_04135	A0A1V8TV60	A0A1V8THS2	Uncharacterized protein.	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	0.905
B0A48_00631	B0A48_05683	A0A1V8TV60	A0A1V8TBL6	Uncharacterized protein.	Uncharacterized protein.	0.991
B0A48_00631	B0A48_07506	A0A1V8TV60	A0A1V8T6G3	Uncharacterized protein.	Uncharacterized protein.	0.426
B0A48_00631	B0A48_11906	A0A1V8TV60	A0A1V8STZ9	Uncharacterized protein.	Uncharacterized protein.	0.426
B0A48_03999	B0A48_04135	A0A1V8TH34	A0A1V8THS2	Chitin-binding type-4 domain-containing protein.	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	0.905
B0A48_03999	B0A48_05683	A0A1V8TH34	A0A1V8TBL6	Chitin-binding type-4 domain-containing protein.	Uncharacterized protein.	0.991
B0A48_03999	B0A48_07506	A0A1V8TH34	A0A1V8T6G3	Chitin-binding type-4 domain-containing protein.	Uncharacterized protein.	0.426
B0A48_03999	B0A48_11906	A0A1V8TH34	A0A1V8STZ9	Chitin-binding type-4 domain-containing protein.	Uncharacterized protein.	0.426
B0A48_04135	B0A48_00631	A0A1V8THS2	A0A1V8TV60	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.905
B0A48_04135	B0A48_03999	A0A1V8THS2	A0A1V8TH34	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Chitin-binding type-4 domain-containing protein.	0.905
B0A48_04135	B0A48_04793	A0A1V8THS2	A0A1V8TDE7	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-6B.	0.923
B0A48_04135	B0A48_05683	A0A1V8THS2	A0A1V8TBL6	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.985
B0A48_04135	B0A48_07506	A0A1V8THS2	A0A1V8T6G3	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.980
B0A48_04135	B0A48_07666	A0A1V8THS2	A0A1V8T785	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	SEC7 domain-containing protein.	0.915
B0A48_04135	B0A48_11737	A0A1V8THS2	A0A1V8SSM0	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	SEC7 domain-containing protein.	0.915
B0A48_04135	B0A48_11906	A0A1V8THS2	A0A1V8STZ9	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.980
B0A48_04135	B0A48_14004	A0A1V8THS2	A0A1V8SM28	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-6B.	0.923
B0A48_04135	B0A48_17701	A0A1V8THS2	A0A1V8SAG4	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.971
B0A48_04793	B0A48_04135	A0A1V8TDE7	A0A1V8THS2	Ras-related protein Rab-6B.	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	0.923
B0A48_04793	B0A48_05683	A0A1V8TDE7	A0A1V8TBL6	Ras-related protein Rab-6B.	Uncharacterized protein.	0.439

page 1 of 3

Network Stats

number of nodes:

2

number of edges:

1

average node degree:

1

avg. local clustering coefficient:

1

expected number of edges:

1

PPI enrichment p-value:

0.5

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000105

Histidine biosynthetic process

5 of 13

2.3

3.87

1.46e-08

GO:0009073

Aromatic amino acid family biosynthetic process

4 of 17

2.08

2.57

5.44e-06

GO:0008652

Cellular amino acid biosynthetic process

9 of 183

1.4

2.25

3.71e-09

GO:0006520

Cellular amino acid metabolic process

10 of 311

1.22

1.76

3.71e-09

GO:0009095

Aromatic amino acid family biosynthetic process, prephenate pathway

2 of 2

2.71

1.56

0.0014

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016836

Hydro-lyase activity

3 of 38

1.61

0.67

0.0478

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

10 of 1823

0.45

0.33

0.0134

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1575

Aromatic amino acid family biosynthetic process, and Histidine biosynthesis

8 of 28

2.17

5.69

6.02e-14

CL:1515

Amino-acid biosynthesis, and Aminotransferase class IV

10 of 58

1.95

5.46

4.37e-16

CL:1608

Histidine biosynthesis

5 of 10

2.41

4.15

6.00e-09

CL:1611

Histidine biosynthesis

3 of 5

2.49

2.28

5.48e-05

CL:1576

Aromatic amino acid family biosynthetic process

3 of 16

1.98

1.56

0.00082

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00400

Phenylalanine, tyrosine and tryptophan biosynthesis

5 of 25

2.01

3.21

8.92e-08

map00340

Histidine metabolism

5 of 29

1.95

3.08

1.16e-07

map01230

Biosynthesis of amino acids

9 of 231

1.3

1.99

2.63e-09

map00401

Novobiocin biosynthesis

2 of 3

2.53

1.69

0.00076

map00360

Phenylalanine metabolism

3 of 36

1.63

1.37

0.00092

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005737

Cytoplasm

11 of 1419

0.6

0.52

8.49e-05

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0368

Histidine biosynthesis

5 of 12

2.33

4.05

6.80e-09

KW-0028

Amino-acid biosynthesis

8 of 88

1.67

3.22

1.88e-10

KW-0057

Aromatic amino acid biosynthesis

3 of 14

2.04

1.79

0.00028

KW-0822

Tryptophan biosynthesis

2 of 6

2.23

1.26

0.0044

KW-0456

Lyase

4 of 110

1.27

0.99

0.0027

(more ...)

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