STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_05362Aamy domain-containing protein. (594 aa)    
Predicted Functional Partners:
B0A48_14697
1,4-alpha-glucan-branching enzyme.
  
 
 0.909
B0A48_14259
1,4-alpha-glucan-branching enzyme.
  
 
 0.909
B0A48_07422
MFS domain-containing protein.
   
 0.850
B0A48_05690
Uncharacterized protein.
   
 0.850
B0A48_11879
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.846
B0A48_07532
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.846
B0A48_08390
CBM20 domain-containing protein.
    
 0.844
B0A48_12371
NtCtMGAM_N domain-containing protein.
    
 0.807
B0A48_03490
NtCtMGAM_N domain-containing protein.
    
 0.807
B0A48_13654
Aamy domain-containing protein.
     
 0.791
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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