STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_05645Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1. (630 aa)    
Predicted Functional Partners:
B0A48_17851
Glyco_transf_20 domain-containing protein.
  
0.993
B0A48_03247
Glyco_transf_20 domain-containing protein.
  
0.993
B0A48_07033
Glyco_transf_20 domain-containing protein.
  
0.983
B0A48_02588
Glyco_transf_20 domain-containing protein.
  
0.983
B0A48_00750
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
  
 0.914
B0A48_00702
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
  
 0.914
B0A48_01118
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.898
B0A48_00310
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.898
B0A48_17732
Trehalase.
  
 0.876
B0A48_15876
Trehalase.
  
 0.876
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.