B0A48_03536 protein (Rachicladosporium antarcticum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

B0A48_03536

Uncharacterized protein. (202 aa)

Predicted Functional Partners:

B0A48_05683

0.937

B0A48_17578

0.750

B0A48_12187

0.750

B0A48_09351

0.750

B0A48_18222

0.699

B0A48_13608

0.699

B0A48_11485

0.699

B0A48_10160

0.699

B0A48_09434

0.699

B0A48_04195

0.699

Your Current Organism:

Rachicladosporium antarcticum

NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A48_03536	B0A48_04195	A0A1V8TKB7	A0A1V8TEN6	Uncharacterized protein.	Uncharacterized protein.	0.699
B0A48_03536	B0A48_05683	A0A1V8TKB7	A0A1V8TBL6	Uncharacterized protein.	Uncharacterized protein.	0.937
B0A48_03536	B0A48_09351	A0A1V8TKB7	A0A1V8T2T8	Uncharacterized protein.	RanBD1 domain-containing protein.	0.750
B0A48_03536	B0A48_09434	A0A1V8TKB7	A0A1V8T034	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.699
B0A48_03536	B0A48_10160	A0A1V8TKB7	A0A1V8SWG7	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.699
B0A48_03536	B0A48_11485	A0A1V8TKB7	A0A1V8SVX5	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.699
B0A48_03536	B0A48_12187	A0A1V8TKB7	A0A1V8SUI6	Uncharacterized protein.	RanBD1 domain-containing protein.	0.750
B0A48_03536	B0A48_13608	A0A1V8TKB7	A0A1V8SP95	Uncharacterized protein.	Uncharacterized protein.	0.699
B0A48_03536	B0A48_17578	A0A1V8TKB7	A0A1V8SB20	Uncharacterized protein.	RanBD1 domain-containing protein.	0.750
B0A48_03536	B0A48_18222	A0A1V8TKB7	A0A1V8S995	Uncharacterized protein.	Uncharacterized protein.	0.699
B0A48_04195	B0A48_03536	A0A1V8TEN6	A0A1V8TKB7	Uncharacterized protein.	Uncharacterized protein.	0.699
B0A48_04195	B0A48_05683	A0A1V8TEN6	A0A1V8TBL6	Uncharacterized protein.	Uncharacterized protein.	0.828
B0A48_04195	B0A48_09434	A0A1V8TEN6	A0A1V8T034	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.859
B0A48_04195	B0A48_10160	A0A1V8TEN6	A0A1V8SWG7	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.860
B0A48_04195	B0A48_11485	A0A1V8TEN6	A0A1V8SVX5	Uncharacterized protein.	FAD_binding_3 domain-containing protein.	0.858
B0A48_04195	B0A48_13608	A0A1V8TEN6	A0A1V8SP95	Uncharacterized protein.	Uncharacterized protein.	0.857
B0A48_04195	B0A48_18222	A0A1V8TEN6	A0A1V8S995	Uncharacterized protein.	Uncharacterized protein.	0.848
B0A48_05683	B0A48_03536	A0A1V8TBL6	A0A1V8TKB7	Uncharacterized protein.	Uncharacterized protein.	0.937
B0A48_05683	B0A48_04195	A0A1V8TBL6	A0A1V8TEN6	Uncharacterized protein.	Uncharacterized protein.	0.828
B0A48_05683	B0A48_09351	A0A1V8TBL6	A0A1V8T2T8	Uncharacterized protein.	RanBD1 domain-containing protein.	0.995

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

21

average node degree:

3.82

avg. local clustering coefficient:

0.643

expected number of edges:

14

PPI enrichment p-value:

0.0389

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0019439

Aromatic compound catabolic process

8 of 56

1.57

2.65

7.00e-09

GO:0009056

Catabolic process

9 of 193

1.09

1.28

9.89e-07

GO:0042537

Benzene-containing compound metabolic process

3 of 10

1.89

1.25

0.0034

GO:0019619

3,4-dihydroxybenzoate catabolic process

2 of 3

2.24

0.82

0.0312

GO:0044282

Small molecule catabolic process

4 of 92

1.06

0.57

0.0371

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051213

Dioxygenase activity

4 of 13

1.91

1.83

0.00016

GO:0005506

Iron ion binding

4 of 13

1.91

1.83

0.00016

GO:0008199

Ferric iron binding

2 of 3

2.24

0.97

0.0160

GO:0004497

Monooxygenase activity

3 of 20

1.59

0.95

0.0106

GO:0016702

Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

2 of 5

2.02

0.83

0.0278

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1699

Mixed, incl. Degradation of aromatic compounds, and Coenzyme A transferase

4 of 27

1.59

1.21

0.0022

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map01220

Degradation of aromatic compounds

5 of 30

1.64

2.02

1.07e-05

map00362

Benzoate degradation

5 of 31

1.62

2.0

1.07e-05

map00643

Styrene degradation

2 of 4

2.12

1.17

0.0061

map00361

Chlorocyclohexane and chlorobenzene degradation

2 of 5

2.02

1.13

0.0069

map00622

Xylene degradation

2 of 14

1.57

0.74

0.0321

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0223

Dioxygenase

3 of 8

1.99

1.47

0.0013

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00775

Dioxygenase

2 of 2

2.42

0.8

0.0349

PF00111

2Fe-2S iron-sulfur cluster binding domain

2 of 2

2.42

0.8

0.0349

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