STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_03046Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (403 aa)    
Predicted Functional Partners:
B0A48_02479
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.836
B0A48_00339
Cytochrome c oxidase subunit 4, mitochondrial.
   
 0.803
B0A48_08995
Uncharacterized protein.
   
 0.793
B0A48_16963
Beta-hexosaminidase.
    
 0.760
B0A48_00971
Cytochrome c oxidase subunit 6, mitochondrial.
   
 0.694
B0A48_00492
Cytochrome c oxidase subunit 6, mitochondrial.
   
 0.694
B0A48_17043
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.692
B0A48_13108
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.692
B0A48_15550
Uncharacterized protein.
   
 0.661
B0A48_15449
Uncharacterized protein.
   
 0.661
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.