STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_02029Lactamase_B domain-containing protein. (297 aa)    
Predicted Functional Partners:
B0A48_01277
Uncharacterized protein.
   
 
 0.816
B0A48_00100
Uncharacterized protein.
   
 
 0.816
B0A48_08201
Uncharacterized protein.
   
   0.814
B0A48_03118
Uncharacterized protein.
   
   0.814
B0A48_11772
DRBM domain-containing protein.
   
 
 0.805
B0A48_07635
DRBM domain-containing protein.
   
 
 0.805
B0A48_07196
Uncharacterized protein.
   
 
 0.803
B0A48_05926
Uncharacterized protein.
   
 
 0.803
B0A48_14837
Uncharacterized protein.
   
   0.793
B0A48_11055
Uncharacterized protein.
   
   0.793
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.