STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_02535G-patch domain-containing protein. (399 aa)    
Predicted Functional Partners:
B0A48_15095
Uncharacterized protein.
   
 0.978
B0A48_03350
Uncharacterized protein.
   
 0.978
B0A48_01355
Uncharacterized protein.
   
 
 0.945
B0A48_00184
Uncharacterized protein.
   
 
 0.945
B0A48_10131
Pre-mRNA-splicing factor cwc2.
    
 
 0.943
B0A48_09464
Pre-mRNA-splicing factor cwc2.
    
 
 0.943
B0A48_06589
Uncharacterized protein.
   
 0.895
B0A48_03694
Uncharacterized protein.
   
 0.895
B0A48_14347
Isochorismatase domain-containing protein.
   
 
 0.894
B0A48_09826
Pre-mRNA-splicing factor cef1.
   
 
 0.894
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.